Sunday 2 July 2017

Pressure Effect on the Folding of G-Quadruplex DNA Modified with Hexaethylene Glycol

Nucleic acids (DNA and RNA) are polymers that can adopt a variety of structures stabilized via base pairing. Watson-Crick type hydrogen bonding results in the canonical double helixbetween two complementary strands. Relying on this simple law of self-assembly, nucleic acids has been used as a drug and nanomaterials.

G-Quadruplex DNA
Hoogsteen-type hydrogen bonding permits formation of non-canonical structures of nucleic acids. In particular, guanine-quadruplex (G-quadruplex) DNA structures are stabilized by guanine quartets that interact via Hoogsteen base pairing. This tetraplex structure coordinates metal ions such as Na+ and K+, which contribute the structural stability. Furthermore, the stabilities of G-quadruplexes are increased in conditions of molecular crowding. These properties indicate that changes in molecular environment can regulate the folding and unfolding of G-quadruplex structures, and external chemical and physical stimuli are useful for control of structures of nucleic acid-based drugs and nanomachines.



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